• Suche: Codon evolution

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Virust5: Harnessing Large Language Models to Predicting Sars-Cov-2 Evolution
Marathe, Vishwajeet ; Bajracharya, Deewan ; Yan, Changhui
2025 IEEE 25th International Conference on Bioinformatics and Bioengineering (BIBE) BIBE Bioinformatics and Bioengineering (BIBE), 2025 IEEE 25th International Conference on. :676-681 Nov, 2025

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2

Codon Usage Pattern and its Influencing Factors for Mitochondrial CO Genes Among Different Subfamilies of Cerambycidae.
Zhang Y ; Yu H ; Dayananda B ; et al.
Publisher: Kluwer Academic/Plenum Publishers Country of Publication: United States NLM ID: 0126611 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1573-4927 (Electronic) Linking ISSN: 00062928 NLM ISO Abbreviation: Biochem Genet Subsets: MEDLINE

Animals Selection, Genetic Evolution, Molecular Base Composition Codon Usage Electron Transport Compl... …
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3

A Phenotype–Genotype Codon Model for Detecting Adaptive Evolution
Jones, Christopher T. ; Youssef, Noor ; Susko, Edward ; et al.
Systematic Biology, 2020 Jul 01. 69(4), 722-738.

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4

LOW RATES OF BINDIN CODON EVOLUTION IN LECITHOTROPHIC HELIOCIDARIS SEA URCHINS
Hart, Michael W. ; Popovic, Iva ; Emlet, Richard B.
Evolution, 2012 Jun 01. 66(6), 1709-1721.

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5

Mitochondrial codon usage bias and novel phylogenetic insights: implications for taxonomic reevaluation of seven Xylotini species (Diptera, Syrphidae, Eristalinae).
Ji Y ; Li H ; Yan W ; et al.
Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164 (Electronic) Linking ISSN: 14712164 NLM ISO Abbreviation: BMC Genomics Subsets: MEDLINE

Animals Evolution, Molecular Phylogeny Codon Usage Diptera genetics Diptera classification …
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6

Mitochondrial Genomes of Three Species of the Family Camaenidae (Gastropoda: Stylommatophora): Structural Features, Codon Usage Patterns, and Phylogenetic Implications.
Ran, Xing‐Ming ; He, Hai‐Yong ; Yang, Lin ; et al.
Ecology & Evolution (20457758). Oct2025, Vol. 15 Issue 10, p1-14. 14p.

Biological evolution Mitochondrial DNA Phylogeny Genomics Snails Morphology …
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7

Genomic factors shaping codon usage across the Saccharomycotina subphylum.
Zavala B ; Dineen L ; Fisher KJ ; et al.
Publisher: Oxford University Press Country of Publication: England NLM ID: 101566598 Publication Model: Print Cited Medium: Internet ISSN: 2160-1836 (Electronic) Linking ISSN: 21601836 NLM ISO Abbreviation: G3 (Bethesda) Subsets: MEDLINE

RNA, Transfer genetics Genomics methods Ascomycota genetics Codon Evolution, Molecular Protein Biosynthesis …
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8

Molecular Evolution in Small Steps under Prevailing Negative Selection: A Nearly Universal Rule of Codon Substitution.
Chen Q ; Lan A ; Shen X ; et al.
Publisher: Oxford University Press Country of Publication: England NLM ID: 101509707 Publication Model: Print Cited Medium: Internet ISSN: 1759-6653 (Electronic) Linking ISSN: 17596653 NLM ISO Abbreviation: Genome Biol Evol Subsets: MEDLINE

Amino Acids genetics Models, Genetic Selection, Genetic Codon Evolution, Molecular
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9

Studying the Evolution of Codon Context in Conserved Gene Sequences
Pinheiro, Miguel ; Oliveira, José L. ; Moura, Gabriela R. ; et al.
2008 International Conference on Biocomputation, Bioinformatics, and Biomedical Technologies Biocomputation, Bioinformatics, and Biomedical Technologies, 2008. BIOTECHNO '08. International Conference on. :159-163 Jun, 2008

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10

Codon Evolution : Mechanisms and Models
Cannarozzi, Gina M., editor ; Schneider, Adrian, editor

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11

Arginine limitation drives a directed codon-dependent DNA sequence evolution response in colorectal cancer cells.
Hsu DJ ; Gao J ; Yamaguchi N ; et al.
Publisher: American Association for the Advancement of Science Country of Publication: United States NLM ID: 101653440 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2375-2548 (Electronic) Linking ISSN: 23752548 NLM ISO Abbreviation: Sci Adv Subsets: MEDLINE

Humans Base Sequence Protein Biosynthesis Proteomics Escherichia coli metabol... Codon metabolism …
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13

Mitochondrial genomes of Macropsini (Hemiptera: Cicadellidae: Eurymelinae): Structural features, codon usage patterns, and phylogenetic implications.
Guo, Meishu ; Wang, JiaJia ; Li, Hu ; et al.
Ecology & Evolution (20457758). Sep2024, Vol. 14 Issue 9, p1-14. 14p.

Biological evolution Natural selection Phylogeny Leafhoppers Genomes
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14

Genetic Algorithms
Machine Learning and AI with Simple Python and Matlab Scripts. Mar 18, 2025

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15

Selection Shapes Synonymous Stop Codon Use in Mammals.
Seoighe C ; Kiniry SJ ; Peters A ; et al.
Publisher: Springer-Verlag Country of Publication: Germany NLM ID: 0360051 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1432-1432 (Electronic) Linking ISSN: 00222844 NLM ISO Abbreviation: J Mol Evol Subsets: MEDLINE

Animals Humans Phylogeny Codon, Terminator Evolution, Molecular Mammals genetics …
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16

Phylogenetic Patterns of Codon Evolution in the ACTIN-DEPOLYMERIZING FACTOR/COFILIN (ADF/CFL) Gene Family.
Roy-Zokan EM ; Dyer KA ; Meagher RB
Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

Actin Depolymerizing Fac... Animals Bayes Theorem Computational Biology me... Datasets as Topic Genetic Variation …
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17

Unusual mammalian usage of TGA stop codons reveals that sequence conservation need not imply purifying selection.
Ho AT ; Hurst LD
Publisher: Public Library of Science Country of Publication: United States NLM ID: 101183755 Publication Model: eCollection Cited Medium: Internet ISSN: 1545-7885 (Electronic) Linking ISSN: 15449173 NLM ISO Abbreviation: PLoS Biol Subsets: MEDLINE

Animals Base Composition Codon, Terminator Mammals genetics Selection, Genetic Evolution, Molecular …
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18

Why time matters: codon evolution and the temporal dynamics of dN/dS.
Mugal CF ; Wolf JB ; Kaj I
Publisher: Oxford University Press Country of Publication: United States NLM ID: 8501455 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1537-1719 (Electronic) Linking ISSN: 07374038 NLM ISO Abbreviation: Mol Biol Evol Subsets: MEDLINE

Amino Acid Substitution Codon metabolism Genetics, Population Mutation Phylogeny Polymorphism, Genetic …
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19

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20

The Codon Usage Code for Cotranslational Folding of Viral Capsids.
Pintó RM ; Bosch A
Publisher: Oxford University Press Country of Publication: England NLM ID: 101509707 Publication Model: Print Cited Medium: Internet ISSN: 1759-6653 (Electronic) Linking ISSN: 17596653 NLM ISO Abbreviation: Genome Biol Evol Subsets: MEDLINE

Capsid Codon genetics Evolution, Molecular Codon Usage Protein Biosynthesis
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